Herramientas

BisoGenet

Herramienta que posibilita la búsqueda de datos de interacciones moleculares y relaciones funcionales en torno a un conjunto de genes/proteínas.

 

Isotopica

Cálculo y visualización de la distribución isotópica a partir de fórmulas moleculares o la secuencia de péptidos, proteínas, DNA, RNA y carbohidratos.

 

SysBiomics

Es una aplicacion web que permite el acceso a la informacion de la base de datos SysBiomics que integra los datos de genes, proteinas, interacciones proteinas-proteinas, biological pathways, gene ontology y silenciamiento de genes.

Sitios de Interés

 

 

 

 

 

 

Próximos Eventos

OMICS 2015

 International Meeting on Bioinformatics and Omics. Varadero Beach, Cuba. Oct 27-30.

 

BIG DATA in Biomedicine

Big Data in Biomedicine Conference. Standord, CA, USA. Mayo 20-22, 2015.

 

ISMB/ECCB 2015

23rd Annual  International  Conference  on Intelligent Systems for Molecular Biology and the 14th European Conference on Computational Biology at the Convention Center Dublin. Ireland. July 10-14.

 

 

Para Uso Interno

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Miranda J, Bringas R. Análisis de Datos de Microarreglos de ADN. Parte II: Cuantificación y Análisis de la Expresión Génica. Biotecnología Aplicada 25. 2008 [abstract] [full text]

 

 

Ramos Y, Gutierrez E, Machado Y, Sánchez A, Castellanos-Serra L, González LJ, Fernández-de-Cossio J, Pérez-Riverol Y, Betancourt L, Gil J, Padrón G, Besada V. Proteomics based on peptide fractionation by SDS-free PAGE. J Proteome Res 7:2427-34, 2008.[abstract] [full text]

 

 

Trujillo LE, Sotolongo M, Menéndez C, Ochagavía ME, Coll Y, Hernández I, Borrás O, Thomma BPHJ, Vera P, Hernández L Different stress signals determine the expression pattern of sugarcane SodERF3, a novel sugarcane Ethylene Responsive Factor (ERF) enhances salt and drought tolerance when over-expressed in tobacco plants, Plant and Cell Physiology , 2008. [abstract] [full text]

 

 

Lee HJ, Manke T, Bringas R, Vingron M. Prioritization of gene regulatory interactions from large-scale modules in yeast, BMC Bioinformatics , 9: 32, 2008. [abstract] [full text]

 

 

Junco JA, Peschke P, Zuna I, Ehemannd V, Fuentes F, Bover E, Pimentel E, Basulto R, Reyes O, Calzada L, Castro MD, Arteaga N, López Y, Garay H, Hernández H, Bringas R, Guillén GE. Immunotherapy of prostate cancer in a murine model using a novel GnRH based vaccine candidate, Vaccine, 25: 8460-68, 2007. [abstract] [full text]

 

 

Ferrer A, Nazábal M, Companioni O, Fernandez de Cossio ME, Camacho H, Cintado A, Benítez J, Casalvilla R, Sautié M, Villareal A, Díaz T, Marrero A, Fernández-de-Cossío J, Hodelin A, Leal L, Ballester L, Novoa LI, Middleton D, Dueñas M. HLA class I polymorphism in the Cuban population, Human Immunology , 68 (11): 918-27, 2007. [abstract] [full text]

 

 

Bringas R. Book Review: Microcompetition with foreign DNA and origin of chronic disease, by Hanan Polansky, Biotecnologia Aplicada , 23 (1): 52, 2006. [abstract] [full text]

 

 

Sánchez A, González LJ, Betancourt L, Gil J, Besada V, Fernandez-de-Cossio J, Rodriguez-Ulloa A, Marrero K, Alvarez F, Fando F, Padrón G. Selective isolation of multiple positively-charged peptides for 2DE-free quantitative proteomics, Proteomics, 6 (16): 4444-55, 2006. [abstract] [full text]

 

 

Sánchez A., González LJ, Ramos Y, Betancourt L, Gil J, Besada V, Fernandez-de-Cossio J, Alvarez F, Padrón G. Selective isolation of lysine-free tryptic peptides delimited by arginine residues: A new tool for proteome analysis, J Proteome Res, 5: 1204-1213, 2006. [abstract] [full text]

 

 

Betancourt L, Gil J, Besada V, Gonzalez LJ, Fernandez-de-Cossio J, Garcia L, Pajon R,Sanchez A, Alvarez F, Padron G. SCAPE: a new tool for the Selective CApture of PEptides in protein identification, J Proteome Res, 4(2): 491-496, 2005. [abstract] [full text]

 

 

Fernandez-de-Cossio J, Gonzalez LJ, Satomi Y, Betancourt L, Ramos Y, Huerta V, Besada V, Padron G, Minamino N, Takao T Automated interpretation of mass spectra of complex mixtures by matching of isotope peak distributions, Rapid Commun Mass Spectrom, 18(20): 2465-72, 2004. [abstract] [full text]

 

 

Fernández-de-Cossío J., Gonzalez L.J., Satomi Y., Betancourt L., Ramos Y., Huerta V., Amaro A., Besada V., Padron G., Minamino N.,Takao T. Isotopica: a tool for the calculation and viewing of complex isotopic envelopes, Nucl. Acids. Res., 32: w674-w678, 2004. [abstract] [full text]

 

 

Ochagavía M.E. and Wodak, S. Progressive Combinatorial Algorithm for Multiple Structural Alignments: Application to Distantly Related Proteins, Proteins: Structure, Function, and Genetics, 55: 436-454, 2004. [abstract] [full text]

 

 

Manke T., Bringas R., Vingron M. Correlating Protein-DNA and Protein-Protein Interaction Networks, Journal of Molecular Biology, 333: 75-85, 2003. [abstract] [full text]

 

 

Ochagavía M.E., Richelle J. and Wodak S.J. Advanced pairwise structure alignment of proteins and analysis of conformational changes, Bioinformatics, 18: 637-640, 2002. [abstract] [full text]

 

 

García C. A., Pérez G., Peña C., Ortega M., Quintana M. , Miranda J. Estrategia para el establecimiento de las especificaciones de calidad en el Centro de Ingeniería Genética y Biotecnología de La Habana, Cuba, Biotecnologia Aplicada , 18: 211-221, 2001. [abstract] [[full text]

 

 

 

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